Visualizing RNA Dynamics in the Cell

Author:   Grigory S Filonov (Pharmacology Department, Weill Cornell Medical College, Cornell University, USA) ,  Samie Jaffrey (Department of Pharmacology, Weill Medical College, Cornell University, USA)
Publisher:   Elsevier Science Publishing Co Inc
Volume:   572
ISBN:  

9780128022924


Pages:   384
Publication Date:   27 May 2016
Format:   Hardback
Availability:   Manufactured on demand   Availability explained
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Visualizing RNA Dynamics in the Cell


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Author:   Grigory S Filonov (Pharmacology Department, Weill Cornell Medical College, Cornell University, USA) ,  Samie Jaffrey (Department of Pharmacology, Weill Medical College, Cornell University, USA)
Publisher:   Elsevier Science Publishing Co Inc
Imprint:   Academic Press Inc
Volume:   572
Dimensions:   Width: 15.20cm , Height: 2.50cm , Length: 22.90cm
Weight:   0.810kg
ISBN:  

9780128022924


ISBN 10:   0128022922
Pages:   384
Publication Date:   27 May 2016
Audience:   Professional and scholarly ,  Professional & Vocational
Format:   Hardback
Publisher's Status:   Active
Availability:   Manufactured on demand   Availability explained
We will order this item for you from a manufactured on demand supplier.

Table of Contents

1. RNA Imaging with Multiplexed Error Robust Fluorescence in Situ Hybridization J.R. Moffitt and X. Zhuang 2. Imaging Single mRNA Dynamics in Live Neurons and Brains H.C. Moon and H.Y. Park 3. Monitoring of Rna Dynamics in Living Cells Using Pum-Hd and Fluorescent Protein Reconstitution Technique H. Yoshimura and T. Ozawa 4. Applications of Hairpin DNA Functionalized Gold Nanoparticles for Imaging mRNA in Living Cells S.R. Jackson, A.C. Wong, A.R. Travis, I.E. Catrina, D.P. Bratu, D.W. Wright and A. Jayagopal 5. In Vivo RNA Visualization in Plants Using MS2 Tagging E.J. Peña and M. Heinlein 6. Trick: A Single-Molecule Method for Imaging the First Round of Translation in Living Cells and Animals J.M. Halstead, J.H. Wilbertz, F. Wippich, T. Lionnet, A. Ephrussi and  J.A. Chao 7. Fluctuation Analysis: Dissecting Transcriptional Kinetics with Signal Theory A. Coulon and D.R. Larson 8. IMAGEtags: Quantifying mRNA Transcription in Real Time with Multiaptamer Reporters J. Ray, I. Shin, M. Ilgu, L. Bendickson, V. Gupta, G.A. Kraus and M. Nilsen-Hamilton 9. A Method for Expressing and Imaging Abundant, Stable, Circular Rnas in Vivo Using Trna Splicing C.A. Schmidt, J.J. Noto, G.S. Filonov and A.G. Matera 10. RNA-ID, A Powerful Tool for Identifying and Characterizing Regulatory Sequences C.E. Brule, K.M. Dean and E.J. Grayhack 11. Fluorescent Protein-Based Quantification of Alternative Splicing of a Target Cassette Exon in Mammalian Cells N.G. Gurskaya, D.B. Staroverov and K.A. Lukyanov 12. Iras: High-Throughput Identification of Novel Alternative Splicing Regulators S. Zheng 13. Analysis of Nonsense-Mediated mRNA Decay at the Single Cell Level using Two Fluorescent Proteins N.G. Gurskaya, A.P. Pereverzev, D.B. Staroverov, N.M. Markina and K.A. Lukyanov 14. Developing Fluorogenic Riboswitches for Imaging Metabolite Concentration Dynamics in Bacterial Cells J.L. Litke, M. You and S.R. Jaffrey

Reviews

Praise for the Series: Should be on the shelves of all libraries in the world as a whole collection. - CHEMISTRY IN INDUSTRY The work most often consulted in the lab. - ENZYMOLOGIA The Methods in Enzymology series represents the gold-standard. - NEUROSCIENCE


Praise for the Series: Should be on the shelves of all libraries in the world as a whole collection. --Chemistry in Industry The work most often consulted in the lab. --Enzymologia The Methods in Enzymology series represents the gold-standard. --Neuroscience


Praise for the Series: Should be on the shelves of all libraries in the world as a whole collection. --Chemistry in Industry The work most often consulted in the lab. --Enzymologia The Methods in Enzymology series represents the gold-standard. --Neuroscience


Author Information

Dr. Grigory Filonov is a postdoctoral associate in the Department of Pharmacology at the Weill Medical College of Cornell University. He received a Ph.D. from the School of Chemistry of M.V. Lomonosov Moscow State University. Dr. Filonov conducted his first postdoctoral training at Albert Einstein College of Medicine of Yeshiva University where he engineered fluorescent proteins that can be used to visualize processes in live animals. Dr. Filonov then joined the laboratory of Dr. Jaffrey at Weill Cornell Medical College. Here Dr. Filonov is working on expanding the “RNA mimics of fluorescent proteins” technology. In particular, Dr. Filonov focuses on developing novel high-throughput screening approaches to isolate RNA-based fluorescent probes that have different spectral and photophysical properties. Additionally, Dr. Filonov is addressing the problem of robust expression of functional synthetic RNAs in live cells and organisms. Dr. Samie Jaffrey is a Professor of Pharmacology at the Weill Medical College of Cornell University. He received an M.D. and Ph.D. from Johns Hopkins School of Medicine where he also conducted postdoctoral work. Dr. Jaffrey’s laboratory focuses on identifying novel RNA regulatory pathways the control protein expression in normal cellular function and in disease processes. His research uses novel imaging, sequencing, microfluidic, and chemical biology approaches to address these questions. Dr. Jaffrey’s laboratory developed a novel class of RNAs referred to as “RNA mimics of green fluorescent protein,” which are used to image RNA localization and monitor RNA processing in living cells. The Jaffrey laboratory extended this technology to create a new class of genetically encoded biosensors composed of RNA that allows signaling molecules to be imaged in living cells.

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