Omic Association Studies with R and Bioconductor

Author:   Juan R. González ,  Alejandro Cáceres
Publisher:   Taylor & Francis Ltd
ISBN:  

9781138340565


Pages:   376
Publication Date:   11 June 2019
Format:   Hardback
Availability:   In Print   Availability explained
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Omic Association Studies with R and Bioconductor


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Full Product Details

Author:   Juan R. González ,  Alejandro Cáceres
Publisher:   Taylor & Francis Ltd
Imprint:   CRC Press
Weight:   0.725kg
ISBN:  

9781138340565


ISBN 10:   1138340561
Pages:   376
Publication Date:   11 June 2019
Audience:   College/higher education ,  General/trade ,  Tertiary & Higher Education ,  General
Format:   Hardback
Publisher's Status:   Active
Availability:   In Print   Availability explained
This item will be ordered in for you from one of our suppliers. Upon receipt, we will promptly dispatch it out to you. For in store availability, please contact us.

Table of Contents

1 Introduction 2 Case examples 3 Dealing with omic data in Bioconductor 4 Genetic association studies 5 Genomic variant studies 6 Adressing batch effects 7 Transcriptomic studies 8 Epigenomic studies 9 Exposomic analysis 10 Enrichment analysis 11 Multiomic data analysis

Reviews

"""This book is a good tool for self-learning analytical strategies for omics data. It requires previous knowledge of R and focuses on getting things done...I think the book would be a good reference for masters or PhD students that have to perform their analysis and need a starting point. Also, for the practicing statistician working with omics data."" - Victor Moreno, ISCB News, July 2020 ""Omic Association Studies with R and Bioconductor is an excellent tool book for those looking to have hands-on guidance to analyze multiomics datasets using established packages. The authors provide comprehensive examples of using genomic, transcriptomic, epigenomic, and exposomic data, as well as their integration, to generate biological hypotheses and explore individual heterogeneity."" – Biometrics"


This book is a good tool for self-learning analytical strategies for omics data. It requires previous knowledge of R and focuses on getting things done...I think the book would be a good reference for masters or PhD students that have to perform their analysis and need a starting point. Also, for the practicing statistician working with omics data. - Victor Moreno, ISCB News, July 2020 Omic Association Studies with R and Bioconductor is an excellent tool book for those looking to have hands-on guidance to analyze multiomics datasets using established packages. The authors provide comprehensive examples of using genomic, transcriptomic, epigenomic, and exposomic data, as well as their integration, to generate biological hypotheses and explore individual heterogeneity. - Biometrics


This book is a good tool for self-learning analytical strategies for omics data. It requires previous knowledge of R and focuses on getting things done...I think the book would be a good reference for masters or PhD students that have to perform their analysis and need a starting point. Also, for the practicing statistician working with omics data. - Victor Moreno, ISCB 2020


Author Information

Juan R. González is an Associate Research Professor leading the Bioinformatics Research Group in Epidemiology at Barcelona Institute for Global Health. He has published extensively on methods and bioinformatics tools to detect structural variants from genomic data and to perform different types of omic association studies. Dr. González is the author of a large number of R and Bioconductor packages including state-of-the-art libraries such as SNPassoc or MAD that have been used to discover new susceptibility genetic factor for complex diseases. Alejandro Caceres is a Senior Statistician in the Bioinformatics Research Group in Epidemiology at Barcelona Institute for Global Health. He has large experience in developing new statistical methods to exploit genomic, transcriptomic and epigenomic data obtained from public repositories. Dr. Cáceres is the author of several R and Bioconductor packages that have been used, for instance, to study the role of polymorphic genomic inversions in complex diseases or to investigate how the downregulation of chromosome Y may affect age-related diseases.

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