Overview

In the last few years, hopes have emerged that simple concepts could perhaps explain the extremely complicated biomolecular processes which are now known to a greater accuracy. In parallel, powerful methods in physics, especially nonlinearity and co-operative effects, have been developed. They apply especially to biological phenomena and can explain coherent excitations with remarkable properties. This book provides a pedagogical introduction to the theory of nonlinear excitations and solutions in a biological environment, and also to the structure and function of biomolecules as well as energy and charge transport in biophysics.

Full Product Details

Author:   Michel Peyrard
Publisher:   Springer-Verlag Berlin and Heidelberg GmbH & Co. KG
Imprint:   Springer-Verlag Berlin and Heidelberg GmbH & Co. K
Volume:   2
Dimensions:   Width: 17.00cm , Height: 2.30cm , Length: 24.40cm
Weight:   0.863kg
ISBN:  

9783540592501

ISBN 10:   3540592504
Pages:   427
Publication Date:   29 May 1995
Audience:   College/higher education ,  Professional and scholarly ,  Postgraduate, Research & Scholarly ,  Professional & Vocational
Format:   Paperback
Publisher's Status:   Active
Availability:   In Print  
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Table of Contents

Lecture 1 The intersection of nonlinear science, molecular biology, and condensed matter physics. Viewpoints.- Lecture 2 Introduction to solitons and their applications in physics and biology.- I DNA, structure and function.- Lecture 3 Selected topics in molecular biology, in need of hard science.- Lecture 4 Modelling the DNA double helix: techniques and results.- Lecture 5 Potential-of-mean-force description of ionic interactions and structural hydration in biomolecular systems.- Lecture 6 Inelastic neutron scattering studies of oriented DNA.- Lecture 7 Model simulations of base pair motion in B-DNA.- Lecture 8 A nonlinear model for DNA melting.- Lecture 9 Dynamics of conformational excitations in the DNA macromolecule.- Lecture 10 Nonlinear dynamics of plasmid pBR322 promoters.- Lecture 11 Helical geometry and DNA models.- Lecture 12 Nonlinear localized excitations and the dynamics of H-bonds in DNA.- II Proteins, conformation and dynamics.- Lecture 13 Proteins and the physics of complexity.- Lecture 14 Multi-basin dynamics of a protein in aqueous solution.- Lecture 15 Nonlinear excitations in molecular crystals with chains of peptide bonds.- Lecture 16 Low temperature Raman spectra of acetanilide and its deuterated derivatives: comparison with normal mode analysis.- Lecture 17 Conformational dynamics of proteins: beyond the nanosecond time scale.- Lecture 18 Motions and correlations of the transmembrane domain of a protein receptor studied by molecular dynamics simulation.- III Energy and charge transport.- Lecture 19 Solitary waves in biology.- Lecture 20 Exact two-quantum states of the semiclassical Davydov model and their thermal stability.- Lecture 21 Post-soliton quantum mechanics.- Lecture 22 Dynamic form factor for the Yomosa model for the energy transport in proteins.- Lecture 23 Energy and charge transfer in photosynthesis.- Lecture 24 The role of nonlinearity in modelling energy transfer in Scheibe aggregates.- Lecture 25 Protons in hydrated protein powders.- Lecture 26 Nonlinear models of collective proton transport in hydrogen-bonded systems.- Lecture 27 Proton-solitons bridge physics with biology.- Lecture 28 Neutron scattering studies of biopolymer-water systems: solvent mobility and collective excitations.- IV Beyond biological molecules.- Lecture 29 The cell's microtubules: self-organization and information processing properties.- Lecture 30 Translation optimization in bacteria: statistical models.- Lecture 31 Dynamics of vibrational dissociation of a pseudo-cluster.- Lecture 32 The step-potential model for ?-electrons in hydrocarbon-systems.- Conclusion.

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