Modeling Peptide-Protein Interactions: Methods and Protocols

Author:   Ora Schueler-Furman ,  Nir London
Publisher:   Humana Press Inc.
Edition:   1st ed. 2017
Volume:   1561
ISBN:  

9781493967964


Pages:   311
Publication Date:   27 February 2017
Format:   Hardback
Availability:   Manufactured on demand   Availability explained
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Modeling Peptide-Protein Interactions: Methods and Protocols


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Author:   Ora Schueler-Furman ,  Nir London
Publisher:   Humana Press Inc.
Imprint:   Humana Press Inc.
Edition:   1st ed. 2017
Volume:   1561
Dimensions:   Width: 17.80cm , Height: 1.90cm , Length: 25.40cm
Weight:   7.538kg
ISBN:  

9781493967964


ISBN 10:   1493967967
Pages:   311
Publication Date:   27 February 2017
Audience:   Professional and scholarly ,  Professional & Vocational
Format:   Hardback
Publisher's Status:   Active
Availability:   Manufactured on demand   Availability explained
We will order this item for you from a manufactured on demand supplier.

Table of Contents

The Usage of ACCLUSTER for Peptide Binding Site Prediction.- Detection of Peptide-Binding Sites on Protein Surfaces using the Peptimap Server.- Peptide Sub-Optimal Conformation Sampling for the Prediction of Protein-Peptide Interactions.- Template-Based Prediction of Protein-Peptide Interactions by Using GalaxyPepDock.- Application of the ATTRACT Coarse-Grained Docking and Atomistic Refinement for Predicting Protein-Peptide Interactions.- Highly Flexible Protein-Peptide Docking Using CABS-Dock.- AnchorDock for Blind Flexible Docking of Peptides to Proteins.- Information-Driven, Ensemble Flexible Peptide Docking Using HADDOCK.- Modeling Peptide-Protein Structure and Binding Using Monte Carlo Sampling Approaches: Rosetta FlexPepDock & FlexPepBind.- Flexible Backbone Methods for Predicting and Designing Peptide Specificity.- SImplifying the Design of Protein-Peptide Interaction Specificity with Sequence-Based Representations of Atomistic Models.- Binding Specificity Profiles from Computational Peptide Screening.- Enriching Peptide Libraries for Binding Affinity and Specificity through Computationally Directed Library Design.- Investigating Protein-Peptide Interactions Using the Schrödinger Computational Suite.- Identifying Loop-Mediated Protein-Protein Interactions using LoopFinder.- Protein-Peptide Interaction Design: PepCrawler and PinaColada.- Modeling and Design of Peptidomimetics to Modulate Protein-Protein Interactions.

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